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SRX560599: Whole genome seq of Eschericia coli: urinary tract - upec-84
1 ILLUMINA (Illumina HiSeq 2000) run: 1.7M spots, 274.7M bases, 207.4Mb downloads

Design: DNA was extracted using Wizard Genomic DNA Purification Kit (Promega). Shotgun sequencing libraries were prepared using the Nextera system (Epicentre BioTechnologies), PCR amplified using FailSafe E PCR mix (Epicentre), monitored by real-time PCR, and removed when exponential growth of product was first observed. Libraries were purified using Agencourt AMPure XP (Beckman Coulter).
Submitted by: University of Washington
Study: Escherichia coli Genome sequencing and assembly
PRJNA248737 • SRP042632 • All experiments • All runs
show Abstracthide Abstract
Whole genome sequencing of extraintestinal pathogenic clinical E. coli strains
Sample:
SAMN02802179 • SRS624895 • All experiments • All runs
Organism: Escherichia coli
Library:
Name: upec-84
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
1  forward102  reverse

Runs: 1 run, 1.7M spots, 274.7M bases, 207.4Mb
Run# of Spots# of BasesSizePublished
SRR13145821,681,277274.7M207.4Mb2014-10-26

ID:
800603

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